If there are index files with no references, they will now be deleted by the repair process.
Such files are likely leftovers from an earlier version that would leave such files if various errors happened.
This PR adds a few extra consistency checks to the database, so any failure in the operations is detected earlier than before.
Especially when cleaning temporary and partial files, it is important that the deletes do not remove unexpected entries.
Also, after a recreate, repair or purge command, the database consistency is verified, so it becomes easier to identify which operation caused the failure.
To assist in trouble shooting, there is also a more elaborate error message if a fileset discrepancy is detected, that pinpoints which versions are affected.
Finally, the repair command has been extended to support recreating a fileset from the remote data.
This commit changes the way the new restore flow loads the extra database connections so these will also apply the temporary folder settings and custom pragmas.
This also changes the logic around the SQLite temporary folder. Previously, this folder would unconditionally be set to the general temporary folder, allowing only an override with a custom pragma.
No the setup checks if the system has the environment variable `SQLITE_TMPDIR` set already. If this variable is already set, it will NOT be overwritten.
Actual effects of this change depends on how SQLite internally resolves the temporary folder.
The code was using a two-way reference linking the database to the results and the results to the database.
However, this was not really used so it ended up just cluttering the code. With this commit, the results and databases are no longer keeping track of each other, and the only interaction is when the results are written to the database at the end of the operation.
To ensure result data is always written, this code has been moved into the controller, which will now flush the results for all operations. Prior to this, only some operations would write result data to the log.
The controller now also handles logic for cleaning old log data and invoking the vacuum command.
Fixed a bug due to using System.Text.Json where some attributes from NewtonSoft.Json were being applied and not picked up.
Rewrote all operation handlers to be async.
This moves the async/sync threshold out into the controller.
Fixed all the uses of cancellation token in the handlers to use the provided cancellation token.
Introduced a new ReusableTransaction that can be passed around, avoiding a ref parameter passing of the transaction instance.
This effectively caused the retention time to be ignored when reading from the database.
Also moved some code related to finding an unfinished fileset into the common database class.